Repository navigation

solo: cbMinP posterior threshold, oneExact guard, adapter-anchored geometry - #150

Closed

BenjaminDEMAILLE wants to merge 6 commits into

scverse:mainfrom

BenjaminDEMAILLE:bd/solo-barcode-chemistry

Closed

solo: cbMinP posterior threshold, oneExact guard, adapter-anchored geometry#150
BenjaminDEMAILLE wants to merge 6 commits into
scverse:mainfrom
BenjaminDEMAILLE:bd/solo-barcode-chemistry

Commits on Jul 28, 2026
- fix(solo): apply STAR's cbMinP posterior threshold and the oneExact guard
  
  BenjaminDEMAILLE
  and
  claude
  committed
  10f7c40
- feat(solo): --soloOutFormatFeaturesGeneField3, and lock the homopolymer-UMI rule
  
  BenjaminDEMAILLE
  and
  claude
  committed
  f98c903
- feat(solo): --soloChemistry geometry presets, and refuse --soloCBtype String
  
  BenjaminDEMAILLE
  and
  claude
  committed
  fde1133
- feat(solo): adapter-anchored CB_UMI_Complex geometry
  
  BenjaminDEMAILLE
  and
  claude
  committed
  3227a24
Commits on Jul 29, 2026
- fix(solo): the adapter search takes the best-scoring match, not the leftmost
  BenjaminDEMAILLE
  committed
  20494db
- revert(solo): drop --soloChemistry, which is not a STAR parameter
  BenjaminDEMAILLE
  committed
  c8a5d7d