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samtools / htsjdk Public

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Wire up CRAM 3.1 codecs for writing and a naive write profile.#1739

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cmnbroad wants to merge 4 commits intomastersamtools/htsjdk:masterfrom

cn_cram_3_1_writesamtools/htsjdk:cn_cram_3_1_writeCopy head branch name to clipboard

Conversation Commits4 (4)Checks Files changed

Closed

Wire up CRAM 3.1 codecs for writing and a naive write profile.#1739
cmnbroad wants to merge 4 commits intomasterfrom
cn_cram_3_1_write

Commits

Commits on Aug 18, 2025

Enable a naive CRAM 3.1 write profile.
cmnbroad
committed
Changes based on instrumented trial runs.
cmnbroad
committed
CRAM 3.1 write tests and code cleanup.
cmnbroad
committed
Temp fix for preSorted=false default.
cmnbroad
committed

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