scrna-analysis-tutorials

In this repository, I explore various single cell genomics analysis and when to apply them using both Python and R.

Python

1. Complete RNAseq workflow
2. RNA Velocity

R

1. single cell RNAseq clustering and labeling Code HTML
2. single cell RNAseq + ATACseq integration Code HTML
3. single cell ATACseq integration Code HTML
4. Gene Set Enrichment Code HTML
5. RNA Trajectory Analysis Code HTML
6. RNA Velocity Analysis Code HTML