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@nanoporetech

Oxford Nanopore Technologies

Direct DNA/RNA analysis for anyone, anywhere.

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  1. dorado dorado Public

    Oxford Nanopore's Basecaller

    C++ 874 129

  2. medaka medaka Public

    Neural-network consensus polishing and variant calling for Oxford Nanopore sequencing data

    Python 527 90

  3. pod5-file-format pod5-file-format Public

    Pod5: a high performance file format for nanopore reads.

    C++ 177 41

  4. modkit modkit Public

    A bioinformatics tool for working with modified bases

    Rust 274 32

Repositories

Showing 10 of 76 repositories
  • hatch-protobuf Public

    Hatch plugin for generating Python files from Protocol Buffers .proto files

    nanoporetech/hatch-protobuf's past year of commit activity
    Python 14 5 1 0 Updated Sep 8, 2026
  • rerio Public

    Research release basecalling models and configurations

    nanoporetech/rerio's past year of commit activity
    Python 121 11 5 1 Updated Sep 7, 2026
  • dorado Public

    Oxford Nanopore's Basecaller

    nanoporetech/dorado's past year of commit activity
    C++ 874 129 90 (1 issue needs help) 4 Updated Sep 3, 2026
  • pod5-file-format Public

    Pod5: a high performance file format for nanopore reads.

    nanoporetech/pod5-file-format's past year of commit activity
    C++ 177 41 46 3 Updated Aug 24, 2026
  • minknow_api Public

    Protobuf and gRPC specifications for the MinKNOW API

    nanoporetech/minknow_api's past year of commit activity
    Python 73 16 44 2 Updated Jul 22, 2026
  • ont-minimap2 Public

    Cross platform builds for minimap2

    nanoporetech/ont-minimap2's past year of commit activity
    CMake 9 3 0 0 Updated Jul 15, 2026
  • modkit Public

    A bioinformatics tool for working with modified bases

    nanoporetech/modkit's past year of commit activity
    Rust 274 32 302 23 Updated Jul 14, 2026
  • pomoxis Public

    Analysis components from Oxford Nanopore Research

    nanoporetech/pomoxis's past year of commit activity
    Python 99 22 10 1 Updated Jul 1, 2026
  • medaka Public

    Neural-network consensus polishing and variant calling for Oxford Nanopore sequencing data

    nanoporetech/medaka's past year of commit activity
    Python 527 90 28 3 Updated May 20, 2026
  • ont-output-specifications Public

    Specifications for output files from MinKNOW, dorado and others

    nanoporetech/ont-output-specifications's past year of commit activity
    Python 6 0 0 0 Updated Mar 18, 2026
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