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properly order the jointseg #190

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properly order the jointseg #190

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2 changes: 2 additions & 0 deletions R/facets-segment.R
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Expand Up @@ -169,6 +169,8 @@ segsnps <- function(mat, cval=25, hetscale=FALSE, delta=0) {
jointsegsummary <- function(jointseg) {
# remove snps with NA in segs (due to NA in cnlr)
jointseg <- jointseg[is.finite(jointseg$seg),]
# properly order the data
jointseg <- jointseg[order(jointseg$seg, jointseg$chrom, jointseg$maploc), ]
# initialize output table
nsegs <- max(jointseg$seg)
# segment start and end indices and number of loci
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