Changes to parser.py and model.py to allow for nonstandard VCF file headers - #326

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Commits on Aug 13, 2020

Changes to parser.py and model.py to allow for nonstandard VCF file headers.
DKFZ-UNITE-Administration
committed
0a9e0af
Adjusted model.py _record.str() to respond with all columns, not just CHROM, POS, REF; and ALT.)
DKFZ-UNITE-Administration
committed
600a429

Commits on Aug 14, 2020

Moved the enumeration of self.samples and self._samples_indexes to after the first row of data is read. This way, non-standard columns of data can be inced or excluded as appropriate.
DKFZ-UNITE-Administration
committed
7a1c849
Corrected little bump I caused in _parse_samples when I modified things to use rowdict.
DKFZ-UNITE-Administration
committed
91f3bd2