major refactoring inc.

.dockerignore

@@ -0,0 +1,12 @@
+tests
+.venv
+.local
+.github
+.vscode
+.gitignore
+
+docs/
+Makefile
+Changelog.md
+
+*.md

.github/instructions/snyk_rules.instructions.md

@@ -0,0 +1,14 @@
+---
+alwaysApply: true
+always_on: true
+trigger: always_on
+applyTo: "**"
+description: Snyk Security At Inception
+---
+
+# Project security best practices
+
+- Always run snyk_code_scan tool for new first party code that is generated in a Snyk-supported language.
+- If any security issues are found based on newly introduced or modified code or dependencies, attempt to fix the issues using the results context from Snyk.
+- Rescan the code after fixing the issues to ensure that the issues were fixed and that there are no newly introduced issues.
+- Repeat this process until no new issues are found.

.gitignore

@@ -1,35 +1,54 @@
-# IDE 
-.vscode/ 
-
-# Flask logging server logs 
-flask_logging_server/logs/simplified/*
-flask_logging_server/logs/dicom_raw_logs/*
-flask_logging_server/logs/exceptions/*
-
-# DICOM server logs 
-dicom_server/exceptions/*.log
-
-# API logs
-API/logs/*.log
-
-# Python cache files
-dicom_server/**/__pycache__/
-*.pyc
-
-# Environment files
-API/.env
+# IDE
+.vscode
+
+# Byte-compiled / optimized / DLL files
+__pycache__
+__pycache__/
+*.py[cod]
+*$py.class
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+*.hypothesis/
+.pytest_cache/
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# Environments
 .env
-
-# Python specific generated files
-__pycache__/ 
-*.pyo
-*.pyd
-*.so 
-
-# Node.js
-node_modules/ 
-
-data/
-
-
-
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# snyk things
+.github/instructions/

CITATION.cff

@@ -0,0 +1,8 @@
+cff-version: 1.2.0
+message: "DICOMHawk citation"
+authors:
+- family-names: "Vasilomanolakis"
+  given-names: "Emmanouil"
+  orcid: "https://orcid.org/0000-0001-5068-9158"
+title: "DICOMHawk"
+url: "https://github.com/honeynet/DICOMHawk"

Changelog.md

@@ -0,0 +1,3 @@
+Dicomhawk 0.1.0 (resease 2026-01-30)
+    * Refactored application
+    * First release.

Makefile

@@ -0,0 +1,9 @@
+.PHONY: docker
+build-docker:
+	docker build -t dicomhawk:latest -f build/docker/Dockerfile.dicomhawk
+
+run-docker:
+	docker run --rm -it -p 104:104 -p 11112:11112 --network=bridge --name dicomhawk dicomhawk:latest
+
+format:
+	black .