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Fix biotools output to keep only last version #17

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Fix biotools output to keep only last version #17

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17 changes: 4 additions & 13 deletions github-ci/src/biocontainersci/biotools.py
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Original file line number Diff line number Diff line change
Expand Up @@ -163,26 +163,17 @@ def run(self, f, labels, branch=None):

data = {
'software': name,
'labels': deepcopy(clabels),
'versions': []
"url": "biocontainers/" + name + ":" + container_version,
"version": container_version,
"type": "Container file",
'labels': deepcopy(clabels)
}

softwares = {'softwares': {}}
softwares["softwares"][name] = data

for file_path in files_to_write:

if name not in softwares["softwares"]:
softwares["softwares"][name] = data

new_download = {
"url": "biocontainers/" + name + ":" + container_version,
"version": container_version,
"type": "Container file",
"labels": deepcopy(clabels)
}
softwares["softwares"][name]["versions"].append(new_download)

with open(file_path, 'w') as fp:
dump(softwares, fp, Dumper=Dumper)

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