fastaUtils

Simple fasta exploration and manipulation

Installation

To install it, simply enter the following command in R:

devtools::install_github('A-BN/fastaUtils')

or in your terminal:

Rscript --slave -e "devtools::install_github('A-BN/fastaUtils')"

Usage

You can use it in R console or directly in your terminal like this:

Rscript --slave -e "library(fastaUtils); 
                    fastaUtils::fastanalyze(fasta = 'path/to/your/file.fasta', 
                      metrics = TRUE, 
                      plot = TRUE,
                      verbose = TRUE)"