best_models.csv

,Unnamed: 0,mct_path,y_path,y_hat_path,config_path,num_tps,num_fps,num_fns,precision,recall,f1,pickle
638,0,./dataset/paraphronima_corneas/whole/test_images_10//Paraphronima_FEG181024_head_sp_8_1423158-image.nii,./dataset/paraphronima_corneas/whole/test_labels_10//Paraphronima_FEG181024_head_sp_8_1423158-corneas.csv,./output/Paraphronima_FEG181024_head_sp_8_1423158-image.logs_paraphronima_corneas_lightning_logs_version_13_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/paraphronima_corneas.yaml,229,10,10,0.9581589958158996,0.9581589958158996,0.9581589958158996,./analysis_output/Paraphronima_FEG181024_head_sp_8_1423158-image.logs_paraphronima_corneas_lightning_logs_version_13_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
672,0,./dataset/paraphronima_corneas/whole/test_images_10//Paraphronima_FEG181024_head_sp_8_1423158-image.nii,./dataset/paraphronima_corneas/whole/test_labels_10//Paraphronima_FEG181024_head_sp_8_1423158-corneas.csv,./output/Paraphronima_FEG181024_head_sp_8_1423158-image.logs_paraphronima_corneas_without_random_scale_lightning_logs_version_3_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/paraphronima_corneas_without_random_scale.yaml,220,9,19,0.960698689956332,0.9205020920502092,0.9401709401709402,./analysis_output/Paraphronima_FEG181024_head_sp_8_1423158-image.logs_paraphronima_corneas_without_random_scale_lightning_logs_version_3_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_pe_results.pickle
177,0,./dataset/paraphronima_corneas/whole/test_images_10//Paraphronima_FEG181024_head_sp_8_1423158-image.nii,./dataset/paraphronima_corneas/whole/test_labels_10//Paraphronima_FEG181024_head_sp_8_1423158-corneas.csv,./output/Paraphronima_FEG181024_head_sp_8_1423158-image.logs_paraphronima_corneas_without_elastic_deformation_lightning_logs_version_2_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/paraphronima_corneas_without_elastic_deformation.yaml,216,5,23,0.9773755656108596,0.9037656903765692,0.9391304347826088,./analysis_output/Paraphronima_FEG181024_head_sp_8_1423158-image.logs_paraphronima_corneas_without_elastic_deformation_lightning_logs_version_2_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_max_filter.resampled_s_results.pickle
451,0,./dataset/paraphronima_corneas/whole/test_images_10//Paraphronima_FEG181024_head_sp_8_1423158-image.nii,./dataset/paraphronima_corneas/whole/test_labels_10//Paraphronima_FEG181024_head_sp_8_1423158-corneas.csv,./output/Paraphronima_FEG181024_head_sp_8_1423158-image.logs_paraphronima_corneas_without_random_rotation_lightning_logs_version_1_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/paraphronima_corneas_without_random_rotation.yaml,205,13,34,0.9403669724770642,0.8577405857740585,0.8971553610503282,./analysis_output/Paraphronima_FEG181024_head_sp_8_1423158-image.logs_paraphronima_corneas_without_random_rotation_lightning_logs_version_1_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_max_filter.resampled_space_results.pickle
994,0,./dataset/fiddlercrab_corneas/whole/test_images_10//dampieri_male_16-image.nii,./dataset/fiddlercrab_corneas/whole/test_labels_10//dampieri_male_16-corneas.csv,./output/dampieri_male_16-image.logs_fiddlercrab_corneas_lightning_logs_version_26_checkpoints_last_x_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_corneas.yaml,5181,1230,75,0.8081422554983622,0.985730593607306,0.8881460529699151,./analysis_output/dampieri_male_16-image.logs_fiddlercrab_corneas_lightning_logs_version_26_checkpoints_last_x_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
304,0,./dataset/fiddlercrab_corneas/whole/test_images_10//dampieri_male_16-image.nii,./dataset/fiddlercrab_corneas/whole/test_labels_10//dampieri_male_16-corneas.csv,./output/dampieri_male_16-image.logs_fiddlercrab_corneas_without_elastic_deformation_lightning_logs_version_2_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_corneas_without_elastic_deformation.yaml,5193,1397,63,0.7880121396054628,0.988013698630137,0.8767516461252743,./analysis_output/dampieri_male_16-image.logs_fiddlercrab_corneas_without_elastic_deformation_lightning_logs_version_2_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
466,0,./dataset/fiddlercrab_corneas/whole/test_images_10//dampieri_male_16-image.nii,./dataset/fiddlercrab_corneas/whole/test_labels_10//dampieri_male_16-corneas.csv,./output/dampieri_male_16-image.logs_fiddlercrab_corneas_hist_std_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_corneas_hist_std.yaml,5188,1411,68,0.7861797242006364,0.987062404870624,0.8752425137072964,./analysis_output/dampieri_male_16-image.logs_fiddlercrab_corneas_hist_std_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
264,0,./dataset/fiddlercrab_corneas/whole/test_images_10//dampieri_male_16-image.nii,./dataset/fiddlercrab_corneas/whole/test_labels_10//dampieri_male_16-corneas.csv,./output/dampieri_male_16-image.logs_fiddlercrab_corneas_hist_std_z_norm_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_corneas_hist_std_z_norm.yaml,5204,1518,52,0.7741743528711693,0.9901065449010654,0.8689263650025046,./analysis_output/dampieri_male_16-image.logs_fiddlercrab_corneas_hist_std_z_norm_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
12,0,./dataset/fiddlercrab_corneas/whole/test_images_10//dampieri_male_16-image.nii,./dataset/fiddlercrab_corneas/whole/test_labels_10//dampieri_male_16-corneas.csv,./output/dampieri_male_16-image.logs_fiddlercrab_corneas_random_affine_prop_1_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_corneas_random_affine_prop_1.yaml,5209,1555,47,0.7701064458900059,0.9910578386605784,0.8667221297836937,./analysis_output/dampieri_male_16-image.logs_fiddlercrab_corneas_random_affine_prop_1_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
985,0,./dataset/fiddlercrab_rhabdoms/whole/test_images_10//flammula_20190925_male_left-image.nii,./dataset/fiddlercrab_rhabdoms/whole/test_labels_10//flammula_20190925_male_left-rhabdoms.csv,./output/flammula_20190925_male_left-image.logs_fiddlercrab_rhabdoms_without_elastic_deformation_lightning_logs_version_3_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_rhabdoms_without_elastic_deformation.yaml,6759,786,1372,0.8958250497017892,0.8312630672733982,0.8623373309517733,./analysis_output/flammula_20190925_male_left-image.logs_fiddlercrab_rhabdoms_without_elastic_deformation_lightning_logs_version_3_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
969,0,./dataset/fiddlercrab_rhabdoms/whole/test_images_10//flammula_20190925_male_left-image.nii,./dataset/fiddlercrab_rhabdoms/whole/test_labels_10//flammula_20190925_male_left-rhabdoms.csv,./output/flammula_20190925_male_left-image.logs_fiddlercrab_rhabdoms_hist_std_z_norm_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_rhabdoms_hist_std_z_norm.yaml,6701,965,1430,0.874119488651187,0.8241298733243143,0.8483889346078369,./analysis_output/flammula_20190925_male_left-image.logs_fiddlercrab_rhabdoms_hist_std_z_norm_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
152,0,./dataset/paraphronima_corneas/whole/test_images_10//P_robisoni_FEG200205_105-image.nii,./dataset/paraphronima_corneas/whole/test_labels_10//P_robisoni_FEG200205_105-corneas.csv,./output/P_robisoni_FEG200205_105-image.logs_paraphronima_corneas_lightning_logs_version_13_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_5_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/paraphronima_corneas.yaml,262,5,95,0.9812734082397004,0.7338935574229691,0.8397435897435898,./analysis_output/P_robisoni_FEG200205_105-image.logs_paraphronima_corneas_lightning_logs_version_13_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_5_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
774,0,./dataset/fiddlercrab_corneas/whole/test_images_10//dampieri_male_16-image.nii,./dataset/fiddlercrab_corneas/whole/test_labels_10//dampieri_male_16-corneas.csv,./output/dampieri_male_16-image.logs_fiddlercrab_corneas_without_random_rotation_lightning_logs_version_2_checkpoints_last_x_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_corneas_without_random_rotation.yaml,5182,1926,74,0.729037703995498,0.9859208523592086,0.8382400517631836,./analysis_output/dampieri_male_16-image.logs_fiddlercrab_corneas_without_random_rotation_lightning_logs_version_2_checkpoints_last_x_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
518,0,./dataset/fiddlercrab_rhabdoms/whole/test_images_10//flammula_20190925_male_left-image.nii,./dataset/fiddlercrab_rhabdoms/whole/test_labels_10//flammula_20190925_male_left-rhabdoms.csv,./output/flammula_20190925_male_left-image.logs_fiddlercrab_rhabdoms_with_target_heatmap_masking_lightning_logs_version_2_checkpoints_last_x_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_rhabdoms_with_target_heatmap_masking.yaml,6482,1099,1649,0.8550323176361958,0.7971959168613947,0.8251018329938901,./analysis_output/flammula_20190925_male_left-image.logs_fiddlercrab_rhabdoms_with_target_heatmap_masking_lightning_logs_version_2_checkpoints_last_x_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
512,0,./dataset/fiddlercrab_rhabdoms/whole/test_images_10//flammula_20190925_male_left-image.nii,./dataset/fiddlercrab_rhabdoms/whole/test_labels_10//flammula_20190925_male_left-rhabdoms.csv,./output/flammula_20190925_male_left-image.logs_fiddlercrab_rhabdoms_lightning_logs_version_10_checkpoints_last_x_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_rhabdoms.yaml,6410,1094,1721,0.8542110874200426,0.7883409174763252,0.8199552286536615,./analysis_output/flammula_20190925_male_left-image.logs_fiddlercrab_rhabdoms_lightning_logs_version_10_checkpoints_last_x_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
759,0,./dataset/fiddlercrab_rhabdoms/whole/test_images_10//flammula_20190925_male_left-image.nii,./dataset/fiddlercrab_rhabdoms/whole/test_labels_10//flammula_20190925_male_left-rhabdoms.csv,./output/flammula_20190925_male_left-image.logs_fiddlercrab_rhabdoms_without_random_scale_lightning_logs_version_3_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_rhabdoms_without_random_scale.yaml,6374,1071,1757,0.8561450638012089,0.7839134177837904,0.8184386235233694,./analysis_output/flammula_20190925_male_left-image.logs_fiddlercrab_rhabdoms_without_random_scale_lightning_logs_version_3_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
1201,0,./dataset/fiddlercrab_rhabdoms/whole/test_images_10//flammula_20190925_male_left-image.nii,./dataset/fiddlercrab_rhabdoms/whole/test_labels_10//flammula_20190925_male_left-rhabdoms.csv,./output/flammula_20190925_male_left-image.logs_fiddlercrab_rhabdoms_hist_std_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_rhabdoms_hist_std.yaml,6599,1547,1532,0.8100908421311073,0.8115852908621326,0.8108373778951895,./analysis_output/flammula_20190925_male_left-image.logs_fiddlercrab_rhabdoms_hist_std_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
886,0,./dataset/paraphronima_corneas/whole/test_images_10//P_robisoni_FEG200205_105-image.nii,./dataset/paraphronima_corneas/whole/test_labels_10//P_robisoni_FEG200205_105-corneas.csv,./output/P_robisoni_FEG200205_105-image.logs_paraphronima_corneas_without_elastic_deformation_lightning_logs_version_2_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/paraphronima_corneas_without_elastic_deformation.yaml,233,8,124,0.966804979253112,0.6526610644257703,0.7792642140468227,./analysis_output/P_robisoni_FEG200205_105-image.logs_paraphronima_corneas_without_elastic_deformation_lightning_logs_version_2_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
227,0,./dataset/paraphronima_corneas/whole/test_images_10//P_robisoni_FEG200205_105-image.nii,./dataset/paraphronima_corneas/whole/test_labels_10//P_robisoni_FEG200205_105-corneas.csv,./output/P_robisoni_FEG200205_105-image.logs_paraphronima_corneas_without_random_rotation_lightning_logs_version_1_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/paraphronima_corneas_without_random_rotation.yaml,250,37,107,0.8710801393728222,0.7002801120448179,0.7763975155279502,./analysis_output/P_robisoni_FEG200205_105-image.logs_paraphronima_corneas_without_random_rotation_lightning_logs_version_1_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
786,0,./dataset/fiddlercrab_corneas/whole/test_images_10//flammula_20190925_male_left-image.nii,./dataset/fiddlercrab_corneas/whole/test_labels_10//flammula_20190925_male_left-corneas.csv,./output/flammula_20190925_male_left-image.logs_fiddlercrab_corneas_random_affine_prop_1_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_corneas_random_affine_prop_1.yaml,5275,423,2856,0.9257634257634256,0.6487516910589104,0.7628895798683925,./analysis_output/flammula_20190925_male_left-image.logs_fiddlercrab_corneas_random_affine_prop_1_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
732,0,./dataset/fiddlercrab_rhabdoms/whole/test_images_10//dampieri_male_16-image.nii,./dataset/fiddlercrab_rhabdoms/whole/test_labels_10//dampieri_male_16-rhabdoms.csv,./output/dampieri_male_16-image.logs_fiddlercrab_rhabdoms_with_target_heatmap_masking_lightning_logs_version_2_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_rhabdoms_with_target_heatmap_masking.yaml,4035,1477,1216,0.7320391872278664,0.7684250618929728,0.7497909504784912,./analysis_output/dampieri_male_16-image.logs_fiddlercrab_rhabdoms_with_target_heatmap_masking_lightning_logs_version_2_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
262,0,./dataset/fiddlercrab_corneas/whole/test_images_10//flammula_20190925_male_left-image.nii,./dataset/fiddlercrab_corneas/whole/test_labels_10//flammula_20190925_male_left-corneas.csv,./output/flammula_20190925_male_left-image.logs_fiddlercrab_corneas_without_elastic_deformation_lightning_logs_version_2_checkpoints_last_x_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks.csv,./configs/fiddlercrab_corneas_without_elastic_deformation.yaml,4930,726,3201,0.8716407355021216,0.6063214856721191,0.7151664611590629,./analysis_output/flammula_20190925_male_left-image.logs_fiddlercrab_corneas_without_elastic_deformation_lightning_logs_version_2_checkpoints_last_x_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks_results.pickle
318,0,./dataset/fiddlercrab_rhabdoms/whole/test_images_10//dampieri_male_16-image.nii,./dataset/fiddlercrab_rhabdoms/whole/test_labels_10//dampieri_male_16-rhabdoms.csv,./output/dampieri_male_16-image.logs_fiddlercrab_rhabdoms_lightning_logs_version_10_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_rhabdoms.yaml,3843,1658,1408,0.698600254499182,0.7318605979813368,0.71484375,./analysis_output/dampieri_male_16-image.logs_fiddlercrab_rhabdoms_lightning_logs_version_10_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
534,0,./dataset/fiddlercrab_corneas/whole/test_images_10//flammula_20190925_male_left-image.nii,./dataset/fiddlercrab_corneas/whole/test_labels_10//flammula_20190925_male_left-corneas.csv,./output/flammula_20190925_male_left-image.logs_fiddlercrab_corneas_lightning_logs_version_26_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_corneas.yaml,4614,478,3517,0.906127258444619,0.5674578772598696,0.697874914920971,./analysis_output/flammula_20190925_male_left-image.logs_fiddlercrab_corneas_lightning_logs_version_26_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
758,0,./dataset/fiddlercrab_corneas/whole/test_images_10//flammula_20190925_male_left-image.nii,./dataset/fiddlercrab_corneas/whole/test_labels_10//flammula_20190925_male_left-corneas.csv,./output/flammula_20190925_male_left-image.logs_fiddlercrab_corneas_without_random_rotation_lightning_logs_version_2_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks.csv,./configs/fiddlercrab_corneas_without_random_rotation.yaml,4869,1016,3262,0.827357689039932,0.5988193334153241,0.694777397260274,./analysis_output/flammula_20190925_male_left-image.logs_fiddlercrab_corneas_without_random_rotation_lightning_logs_version_2_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks_results.pickle
21,0,./dataset/fiddlercrab_rhabdoms/whole/test_images_10//flammula_20190925_male_left-image.nii,./dataset/fiddlercrab_rhabdoms/whole/test_labels_10//flammula_20190925_male_left-rhabdoms.csv,./output/flammula_20190925_male_left-image.logs_fiddlercrab_rhabdoms_without_random_rotation_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_rhabdoms_without_random_rotation.yaml,4298,870,3833,0.8316563467492261,0.5285942688476202,0.6463643882998722,./analysis_output/flammula_20190925_male_left-image.logs_fiddlercrab_rhabdoms_without_random_rotation_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
982,0,./dataset/fiddlercrab_corneas/whole/test_images_10//flammula_20190925_male_left-image.nii,./dataset/fiddlercrab_corneas/whole/test_labels_10//flammula_20190925_male_left-corneas.csv,./output/flammula_20190925_male_left-image.logs_fiddlercrab_corneas_hist_std_z_norm_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks.csv,./configs/fiddlercrab_corneas_hist_std_z_norm.yaml,4140,549,3991,0.8829174664107485,0.5091624646414955,0.6458658346333853,./analysis_output/flammula_20190925_male_left-image.logs_fiddlercrab_corneas_hist_std_z_norm_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks_results.pickle
1257,0,./dataset/fiddlercrab_rhabdoms/whole/test_images_10//dampieri_male_16-image.nii,./dataset/fiddlercrab_rhabdoms/whole/test_labels_10//dampieri_male_16-rhabdoms.csv,./output/dampieri_male_16-image.logs_fiddlercrab_rhabdoms_hist_std_z_norm_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_5_method_center_of_mass.resampled_space_peaks.csv,./configs/fiddlercrab_rhabdoms_hist_std_z_norm.yaml,2679,523,2572,0.8366645846346034,0.5101885355170444,0.6338578019637999,./analysis_output/dampieri_male_16-image.logs_fiddlercrab_rhabdoms_hist_std_z_norm_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_5_method_center_of_mass.resampled_space_peaks_results.pickle
671,0,./dataset/paraphronima_corneas/whole/test_images_10//P_robisoni_FEG200205_105-image.nii,./dataset/paraphronima_corneas/whole/test_labels_10//P_robisoni_FEG200205_105-corneas.csv,./output/P_robisoni_FEG200205_105-image.logs_paraphronima_corneas_without_random_scale_lightning_logs_version_3_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/paraphronima_corneas_without_random_scale.yaml,148,3,209,0.9801324503311258,0.4145658263305322,0.5826771653543308,./analysis_output/P_robisoni_FEG200205_105-image.logs_paraphronima_corneas_without_random_scale_lightning_logs_version_3_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
1253,0,./dataset/paraphronima_corneas/whole/test_images_10//P_crassipes_FEG190213_003b_02_head-image.nii,./dataset/paraphronima_corneas/whole/test_labels_10//P_crassipes_FEG190213_003b_02_head-corneas.csv,./output/P_crassipes_FEG190213_003b_02_head-image.logs_paraphronima_corneas_without_random_rotation_lightning_logs_version_1_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_5_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/paraphronima_corneas_without_random_rotation.yaml,107,6,159,0.9469026548672568,0.4022556390977443,0.5646437994722955,./analysis_output/P_crassipes_FEG190213_003b_02_head-image.logs_paraphronima_corneas_without_random_rotation_lightning_logs_version_1_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_5_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
790,0,./dataset/fiddlercrab_corneas/whole/test_images_10//flammula_20190925_male_left-image.nii,./dataset/fiddlercrab_corneas/whole/test_labels_10//flammula_20190925_male_left-corneas.csv,./output/flammula_20190925_male_left-image.logs_fiddlercrab_corneas_hist_std_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks.csv,./configs/fiddlercrab_corneas_hist_std.yaml,2965,374,5166,0.8879904162923031,0.3646537941212643,0.5170008718395814,./analysis_output/flammula_20190925_male_left-image.logs_fiddlercrab_corneas_hist_std_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks_results.pickle
738,0,./dataset/fiddlercrab_rhabdoms/whole/test_images_10//dampieri_male_16-image.nii,./dataset/fiddlercrab_rhabdoms/whole/test_labels_10//dampieri_male_16-rhabdoms.csv,./output/dampieri_male_16-image.logs_fiddlercrab_rhabdoms_without_random_scale_lightning_logs_version_3_checkpoints_last_x_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_rhabdoms_without_random_scale.yaml,2606,2949,2645,0.4691269126912691,0.4962864216339744,0.4823246344623357,./analysis_output/dampieri_male_16-image.logs_fiddlercrab_rhabdoms_without_random_scale_lightning_logs_version_3_checkpoints_last_x_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
642,0,./dataset/paraphronima_rhabdoms/whole/test_images_10//P_crassipes_FEG191022_077A-image.nii,./dataset/paraphronima_rhabdoms/whole/test_labels_10//P_crassipes_FEG191022_077A-rhabdoms.csv,./output/P_crassipes_FEG191022_077A-image.logs_paraphronima_rhabdoms_whole_scans_lightning_logs_version_1_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_25_prediction_peak_min_val_0_5_method_center_of_mass.resampled_space_peaks.csv,./configs/paraphronima_rhabdoms_whole_scans.yaml,83,70,123,0.5424836601307189,0.4029126213592233,0.4623955431754875,./analysis_output/P_crassipes_FEG191022_077A-image.logs_paraphronima_rhabdoms_whole_scans_lightning_logs_version_1_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_25_prediction_peak_min_val_0_5_method_center_of_mass.resampled_space_peaks_results.pickle
268,0,./dataset/fiddlercrab_rhabdoms/whole/test_images_10//dampieri_male_16-image.nii,./dataset/fiddlercrab_rhabdoms/whole/test_labels_10//dampieri_male_16-rhabdoms.csv,./output/dampieri_male_16-image.logs_fiddlercrab_rhabdoms_hist_std_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks.csv,./configs/fiddlercrab_rhabdoms_hist_std.yaml,2237,2251,3014,0.498440285204991,0.4260140925537993,0.4593900811171578,./analysis_output/dampieri_male_16-image.logs_fiddlercrab_rhabdoms_hist_std_lightning_logs_version_0_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks_results.pickle
235,0,./dataset/fiddlercrab_rhabdoms/whole/test_images_10//dampieri_male_16-image.nii,./dataset/fiddlercrab_rhabdoms/whole/test_labels_10//dampieri_male_16-rhabdoms.csv,./output/dampieri_male_16-image.logs_fiddlercrab_rhabdoms_without_elastic_deformation_lightning_logs_version_3_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/fiddlercrab_rhabdoms_without_elastic_deformation.yaml,2256,2629,2995,0.4618219037871033,0.4296324509617216,0.4451460142067877,./analysis_output/dampieri_male_16-image.logs_fiddlercrab_rhabdoms_without_elastic_deformation_lightning_logs_version_3_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
206,0,./dataset/paraphronima_corneas/whole/test_images_10//P_crassipes_FEG190801_034_00001_new-image.nii,./dataset/paraphronima_corneas/whole/test_labels_10//P_crassipes_FEG190801_034_00001_new-corneas.csv,./output/P_crassipes_FEG190801_034_00001_new-image.logs_paraphronima_corneas_without_random_scale_lightning_logs_version_3_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_5_prediction_peak_min_val_0_5_method_center_of_mass.resampled_space_peaks.csv,./configs/paraphronima_corneas_without_random_scale.yaml,73,47,172,0.6083333333333333,0.2979591836734694,0.4,./analysis_output/P_crassipes_FEG190801_034_00001_new-image.logs_paraphronima_corneas_without_random_scale_lightning_logs_version_3_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_5_prediction_peak_min_val_0_5_method_center_of_mass.resampled_space_peaks_results.pickle
101,0,./dataset/paraphronima_rhabdoms/whole/test_images_10//FEG200205_108_crop-image.nii,./dataset/paraphronima_rhabdoms/whole/test_labels_10//FEG200205_108_crop-rhabdoms.csv,./output/FEG200205_108_crop-image.logs_paraphronima_rhabdoms_thresholded_heatmaps_lightning_logs_version_15_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_5_method_center_of_mass.resampled_space_peaks.csv,./configs/paraphronima_rhabdoms_thresholded_heatmaps.yaml,73,47,189,0.6083333333333333,0.2786259541984733,0.3821989528795811,./analysis_output/FEG200205_108_crop-image.logs_paraphronima_rhabdoms_thresholded_heatmaps_lightning_logs_version_15_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_5_method_center_of_mass.resampled_space_peaks_results.pickle
1108,0,./dataset/paraphronima_rhabdoms/whole/test_images_10//FEG200205_108_crop-image.nii,./dataset/paraphronima_rhabdoms/whole/test_labels_10//FEG200205_108_crop-rhabdoms.csv,./output/FEG200205_108_crop-image.logs_paraphronima_rhabdoms_whole_scans_lightning_logs_version_1_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks.csv,./configs/paraphronima_rhabdoms_whole_scans.yaml,84,106,178,0.4421052631578947,0.3206106870229007,0.3716814159292035,./analysis_output/FEG200205_108_crop-image.logs_paraphronima_rhabdoms_whole_scans_lightning_logs_version_1_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks_results.pickle
812,0,./dataset/paraphronima_rhabdoms/whole/test_images_10//P_crassipes_FEG191022_077A-image.nii,./dataset/paraphronima_rhabdoms/whole/test_labels_10//P_crassipes_FEG191022_077A-rhabdoms.csv,./output/P_crassipes_FEG191022_077A-image.logs_paraphronima_rhabdoms_lightning_logs_version_25_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/paraphronima_rhabdoms.yaml,47,7,159,0.8703703703703703,0.2281553398058252,0.3615384615384616,./analysis_output/P_crassipes_FEG191022_077A-image.logs_paraphronima_rhabdoms_lightning_logs_version_25_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_25_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
822,0,./dataset/paraphronima_rhabdoms/whole/test_images_10//P_crassipes_FEG191022_077A-image.nii,./dataset/paraphronima_rhabdoms/whole/test_labels_10//P_crassipes_FEG191022_077A-rhabdoms.csv,./output/P_crassipes_FEG191022_077A-image.logs_paraphronima_rhabdoms_thresholded_heatmaps_lightning_logs_version_15_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_25_prediction_peak_min_val_0_5_method_center_of_mass.resampled_space_peaks.csv,./configs/paraphronima_rhabdoms_thresholded_heatmaps.yaml,60,66,146,0.4761904761904761,0.2912621359223301,0.3614457831325301,./analysis_output/P_crassipes_FEG191022_077A-image.logs_paraphronima_rhabdoms_thresholded_heatmaps_lightning_logs_version_15_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_25_prediction_peak_min_val_0_5_method_center_of_mass.resampled_space_peaks_results.pickle
154,0,./dataset/paraphronima_corneas/whole/test_images_10//P_crassipes_FEG190213_003b_02_head-image.nii,./dataset/paraphronima_corneas/whole/test_labels_10//P_crassipes_FEG190213_003b_02_head-corneas.csv,./output/P_crassipes_FEG190213_003b_02_head-image.logs_paraphronima_corneas_lightning_logs_version_13_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks.csv,./configs/paraphronima_corneas.yaml,52,0,214,1.0,0.1954887218045112,0.3270440251572326,./analysis_output/P_crassipes_FEG190213_003b_02_head-image.logs_paraphronima_corneas_lightning_logs_version_13_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks_results.pickle
591,0,./dataset/paraphronima_rhabdoms/whole/test_images_10//P_crassipes_FEG200129_099-image.nii,./dataset/paraphronima_rhabdoms/whole/test_labels_10//P_crassipes_FEG200129_099-rhabdoms.csv,./output/P_crassipes_FEG200129_099-image.logs_paraphronima_rhabdoms_thresholded_heatmaps_lightning_logs_version_15_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_5_method_max_filter.resampled_space_peaks.csv,./configs/paraphronima_rhabdoms_thresholded_heatmaps.yaml,79,182,161,0.3026819923371647,0.3291666666666666,0.3153692614770459,./analysis_output/P_crassipes_FEG200129_099-image.logs_paraphronima_rhabdoms_thresholded_heatmaps_lightning_logs_version_15_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_5_method_max_filter.resampled_space_peaks_results.pickle
405,0,./dataset/paraphronima_rhabdoms/whole/test_images_10//P_crassipes_FEG200129_099-image.nii,./dataset/paraphronima_rhabdoms/whole/test_labels_10//P_crassipes_FEG200129_099-rhabdoms.csv,./output/P_crassipes_FEG200129_099-image.logs_paraphronima_rhabdoms_whole_scans_lightning_logs_version_1_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_5_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks.csv,./configs/paraphronima_rhabdoms_whole_scans.yaml,47,18,193,0.7230769230769231,0.1958333333333333,0.3081967213114754,./analysis_output/P_crassipes_FEG200129_099-image.logs_paraphronima_rhabdoms_whole_scans_lightning_logs_version_1_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_5_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks_results.pickle
669,0,./dataset/paraphronima_corneas/whole/test_images_10//P_crassipes_FEG190213_003b_02_head-image.nii,./dataset/paraphronima_corneas/whole/test_labels_10//P_crassipes_FEG190213_003b_02_head-corneas.csv,./output/P_crassipes_FEG190213_003b_02_head-image.logs_paraphronima_corneas_without_random_scale_lightning_logs_version_3_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_5_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/paraphronima_corneas_without_random_scale.yaml,41,8,225,0.8367346938775511,0.1541353383458646,0.2603174603174603,./analysis_output/P_crassipes_FEG190213_003b_02_head-image.logs_paraphronima_corneas_without_random_scale_lightning_logs_version_3_checkpoints_last_ckptx_3_y_3_z_3_average_threshold_0_5_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle
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62,0,./dataset/paraphronima_rhabdoms/whole/test_images_10//P_crassipes_FEG200129_099-image.nii,./dataset/paraphronima_rhabdoms/whole/test_labels_10//P_crassipes_FEG200129_099-rhabdoms.csv,./output/P_crassipes_FEG200129_099-image.logs_paraphronima_rhabdoms_without_elastic_deformation_lightning_logs_version_2_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks.csv,./configs/paraphronima_rhabdoms_without_elastic_deformation.yaml,3,1084,237,0.0027598896044158,0.0125,0.0045214770158251,./analysis_output/P_crassipes_FEG200129_099-image.logs_paraphronima_rhabdoms_without_elastic_deformation_lightning_logs_version_2_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks_results.pickle
729,0,./dataset/paraphronima_rhabdoms/whole/test_images_10//P_crassipes_FEG200129_099-image.nii,./dataset/paraphronima_rhabdoms/whole/test_labels_10//P_crassipes_FEG200129_099-rhabdoms.csv,./output/P_crassipes_FEG200129_099-image.logs_paraphronima_rhabdoms_without_random_scale_lightning_logs_version_3_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks.csv,./configs/paraphronima_rhabdoms_without_random_scale.yaml,1,499,239,0.002,0.0041666666666666,0.0027027027027027,./analysis_output/P_crassipes_FEG200129_099-image.logs_paraphronima_rhabdoms_without_random_scale_lightning_logs_version_3_checkpoints_last_x_3_y_3_z_3_average_threshold_0.25_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks_results.pickle
989,0,./dataset/paraphronima_rhabdoms/whole/test_images_10//P_crassipes_FEG200129_099-image.nii,./dataset/paraphronima_rhabdoms/whole/test_labels_10//P_crassipes_FEG200129_099-rhabdoms.csv,./output/P_crassipes_FEG200129_099-image.logs_paraphronima_rhabdoms_without_random_rotation_lightning_logs_version_2_checkpoints_last_x_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks.csv,./configs/paraphronima_rhabdoms_without_random_rotation.yaml,1,682,239,0.0014641288433382,0.0041666666666666,0.0021668472372697,./analysis_output/P_crassipes_FEG200129_099-image.logs_paraphronima_rhabdoms_without_random_rotation_lightning_logs_version_2_checkpoints_last_x_3_y_3_z_3_average_threshold_None_prediction_peak_min_val_0_25_method_center_of_mass.resampled_space_peaks_results.pickle
108,0,./dataset/paraphronima_corneas/whole/test_images_10//P_gracilis_FEG190213_003a_head-image.nii,./dataset/paraphronima_corneas/whole/test_labels_10//P_gracilis_FEG190213_003a_head-corneas.csv,./output/P_gracilis_FEG190213_003a_head-image.logs_paraphronima_corneas_lightning_logs_version_11_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks.csv,./configs/paraphronima_corneas.yaml,0,1,88,0.0,0.0,,./analysis_output/P_gracilis_FEG190213_003a_head-image.logs_paraphronima_corneas_lightning_logs_version_11_checkpoints_last_x_3_y_3_z_3_average_threshold_0.5_prediction_peak_min_val_0_25_method_max_filter.resampled_space_peaks_results.pickle