cutandrun/modules.json at master · cmwilson24/cutandrun · GitHub

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{
    "name": "nf-core/cutandrun",
    "homePage": "https://github.com/nf-core/cutandrun",
    "repos": {
        "nf-core/modules": {
            "bedtools/bamtobed": {
                "git_sha": "3aacd46da2b221ed47aaa05c413a828538d2c2ae"
            },
            "bedtools/genomecov": {
                "git_sha": "e8b33e6eb1be2a03abdd2c06068f9a5cebc02bb4"
            },
            "bedtools/intersect": {
                "git_sha": "3aacd46da2b221ed47aaa05c413a828538d2c2ae"
            },
            "bedtools/merge": {
                "git_sha": "3aacd46da2b221ed47aaa05c413a828538d2c2ae"
            },
            "bedtools/sort": {
                "git_sha": "2959b4ba070d138d1577acc48d35cc669fbef972"
            },
            "bowtie2/align": {
                "git_sha": "3aacd46da2b221ed47aaa05c413a828538d2c2ae"
            },
            "bowtie2/build": {
                "git_sha": "3aacd46da2b221ed47aaa05c413a828538d2c2ae"
            },
            "cat/fastq": {
                "git_sha": "3aacd46da2b221ed47aaa05c413a828538d2c2ae"
            },
            "custom/getchromsizes": {
                "git_sha": "13b8a16f4a6945af9df146b67972eb70b52e9844"
            },
            "deeptools/computematrix": {
                "git_sha": "49da8642876ae4d91128168cd0db4f1c858d7792"
            },
            "deeptools/plotheatmap": {
                "git_sha": "49da8642876ae4d91128168cd0db4f1c858d7792"
            },
            "fastqc": {
                "git_sha": "3aacd46da2b221ed47aaa05c413a828538d2c2ae"
            },
            "gunzip": {
                "git_sha": "e560fbbc3ed68e62bc810a50f552394056f81762"
            },
            "picard/markduplicates": {
                "git_sha": "3aacd46da2b221ed47aaa05c413a828538d2c2ae"
            },
            "samtools/flagstat": {
                "git_sha": "49da8642876ae4d91128168cd0db4f1c858d7792"
            },
            "samtools/idxstats": {
                "git_sha": "3aacd46da2b221ed47aaa05c413a828538d2c2ae"
            },
            "samtools/index": {
                "git_sha": "49da8642876ae4d91128168cd0db4f1c858d7792"
            },
            "samtools/sort": {
                "git_sha": "3aacd46da2b221ed47aaa05c413a828538d2c2ae"
            },
            "samtools/stats": {
                "git_sha": "49da8642876ae4d91128168cd0db4f1c858d7792"
            },
            "samtools/view": {
                "git_sha": "ac1e6df076195cec553a2079c9cebd94026a0d47"
            },
            "seacr/callpeak": {
                "git_sha": "4d89d6b2f0c478ac7ef80ece5cad44fdf7ffd614"
            },
            "ucsc/bedclip": {
                "git_sha": "49da8642876ae4d91128168cd0db4f1c858d7792"
            },
            "ucsc/bedgraphtobigwig": {
                "git_sha": "49da8642876ae4d91128168cd0db4f1c858d7792"
            },
            "untar": {
                "git_sha": "3aacd46da2b221ed47aaa05c413a828538d2c2ae"
            }
        }
    }
}