RCMD check if throwing few warnigns thats failing the CI checks. @rahulchauhan049 @saxenism can you please take a look?
rcmdcheck::rcmdcheck(args = c("--no-manual"), error_on = "warning", check_dir = "check")
√ checking for file 'C:\Users\Thiloshon\Documents\RProjects\dashboard.experiment/DESCRIPTION' ...
- preparing 'bddashboard': (770ms)
√ checking DESCRIPTION meta-information ...
- checking for LF line-endings in source and make files and shell scripts
- checking for empty or unneeded directories
- building 'bddashboard_0.1.1.tar.gz'
-- R CMD check ---------------------------------------------------------------------------------------------------
- using log directory 'C:/Users/Thiloshon/Documents/RProjects/dashboard.experiment/check/bddashboard.Rcheck' (421ms)
- using R version 4.1.1 (2021-08-10)
- using platform: x86_64-w64-mingw32 (64-bit)
- using session charset: ISO8859-1
- using option '--no-manual' (1.8s)
√ checking for file 'bddashboard/DESCRIPTION'
- this is package 'bddashboard' version '0.1.1'
- package encoding: UTF-8
√ checking package namespace information
√ checking package dependencies (1.2s)
√ checking if this is a source package ...
√ checking if there is a namespace
√ checking for .dll and .exe files
√ checking for hidden files and directories ...
√ checking for portable file names ...
W checking whether package 'bddashboard' can be installed (23.9s)
Found the following significant warnings:
Warning: replacing previous import 'formattable::style' by 'plotly::style' when loading 'bddashboard'
Warning: replacing previous import 'DT::dataTableOutput' by 'shiny::dataTableOutput' when loading 'bddashboard'
Warning: replacing previous import 'DT::renderDataTable' by 'shiny::renderDataTable' when loading 'bddashboard'
Warning: replacing previous import 'flexdashboard::valueBox' by 'shinydashboard::valueBox' when loading 'bddashboard'
Warning: replacing previous import 'flexdashboard::renderValueBox' by 'shinydashboard::renderValueBox' when loading 'bddashboard'
Warning: replacing previous import 'flexdashboard::valueBoxOutput' by 'shinydashboard::valueBoxOutput' when loading 'bddashboard'
Warning: replacing previous import 'shiny::runExample' by 'shinyjs::runExample' when loading 'bddashboard'
Warning: replacing previous import 'shinyWidgets::alert' by 'shinyjs::alert' when loading 'bddashboard'
Warning: replacing previous import 'shinyjs::show' by 'sp::show' when loading 'bddashboard'
See 'C:/Users/Thiloshon/Documents/RProjects/dashboard.experiment/check/bddashboard.Rcheck/00install.out' for details.
√ checking package directory ...
N checking DESCRIPTION meta-information (465ms)
Malformed Description field: should contain one or more complete sentences.
Non-standard license specification:
What license is it under?
Standardizable: FALSE
N checking top-level files
File
LICENSE
is not mentioned in the DESCRIPTION file.
√ checking for left-over files ...
√ checking index information
√ checking package subdirectories ...
√ checking R files for non-ASCII characters ...
√ checking R files for syntax errors ...
√ checking whether the package can be loaded (3.2s)
√ checking whether the package can be loaded with stated dependencies (3.8s)
√ checking whether the package can be unloaded cleanly (3.6s)
√ checking whether the namespace can be loaded with stated dependencies (3s)
√ checking whether the namespace can be unloaded cleanly (3.5s)
W checking dependencies in R code (3.2s)
'::' or ':::' import not declared from: 'stringr'
Namespace in Imports field not imported from: 'pkgload'
All declared Imports should be used.
√ checking S3 generic/method consistency (5s)
√ checking replacement functions (3.4s)
√ checking foreign function calls (3.3s)
N checking R code for possible problems (9.9s)
mod_DT_server: no visible global function definition for 'setNames'
mod_data_summary_server: no visible global function definition for
'na.omit'
mod_leaflet_server: no visible global function definition for 'na.omit'
mod_missing_data_server: no visible binding for global variable
'missing_temporal'
mod_missing_data_server: no visible binding for global variable
'missing_taxonomic'
mod_plot_field_selector_server: no visible global function definition
for 'setNames'
mod_plotly_bars_server: no visible global function definition for
'colorRampPalette'
mod_plotly_bubble_server: no visible binding for global variable 'Freq'
mod_plotly_bubble_server: no visible global function definition for
'colorRampPalette'
mod_plotly_line_server: no visible global function definition for
'na.omit'
mod_plotly_line_server: no visible binding for global variable 'Freq'
Undefined global functions or variables:
Freq colorRampPalette missing_taxonomic missing_temporal na.omit
setNames
Consider adding
importFrom("grDevices", "colorRampPalette")
importFrom("stats", "na.omit", "setNames")
to your NAMESPACE file.
√ checking Rd files (345ms)
√ checking Rd metadata ...
√ checking Rd cross-references (347ms)
W checking for missing documentation entries (3.1s)
Undocumented code objects:
'dictionary'
Undocumented data sets:
'dictionary'
All user-level objects in a package should have documentation entries.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
√ checking for code/documentation mismatches (8.9s)
√ checking Rd \usage sections (4.3s)
√ checking Rd contents ...
√ checking for unstated dependencies in examples ...
√ checking contents of 'data' directory ...
√ checking data for non-ASCII characters (339ms)
√ checking LazyData
W checking data for ASCII and uncompressed saves (450ms)
Warning: package needs dependence on R (>= 2.10)
- checking examples ... NONE
See
'C:/Users/Thiloshon/Documents/RProjects/dashboard.experiment/check/bddashboard.Rcheck/00check.log'
for details.
-- R CMD check results -------------------------------------------------------------------- bddashboard 0.1.1 ----
Duration: 1m 31.2s
> checking whether package 'bddashboard' can be installed ... WARNING
See below...
> checking dependencies in R code ... WARNING
'::' or ':::' import not declared from: 'stringr'
Namespace in Imports field not imported from: 'pkgload'
All declared Imports should be used.
> checking for missing documentation entries ... WARNING
Undocumented code objects:
'dictionary'
Undocumented data sets:
'dictionary'
All user-level objects in a package should have documentation entries.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
> checking data for ASCII and uncompressed saves ... WARNING
Warning: package needs dependence on R (>= 2.10)
> checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
Non-standard license specification:
What license is it under?
Standardizable: FALSE
> checking top-level files ... NOTE
File
LICENSE
is not mentioned in the DESCRIPTION file.
> checking R code for possible problems ... NOTE
mod_DT_server: no visible global function definition for 'setNames'
mod_data_summary_server: no visible global function definition for
'na.omit'
mod_leaflet_server: no visible global function definition for 'na.omit'
mod_missing_data_server: no visible binding for global variable
'missing_temporal'
mod_missing_data_server: no visible binding for global variable
'missing_taxonomic'
mod_plot_field_selector_server: no visible global function definition
for 'setNames'
mod_plotly_bars_server: no visible global function definition for
'colorRampPalette'
mod_plotly_bubble_server: no visible binding for global variable 'Freq'
mod_plotly_bubble_server: no visible global function definition for
'colorRampPalette'
mod_plotly_line_server: no visible global function definition for
'na.omit'
mod_plotly_line_server: no visible binding for global variable 'Freq'
Undefined global functions or variables:
Freq colorRampPalette missing_taxonomic missing_temporal na.omit
setNames
Consider adding
importFrom("grDevices", "colorRampPalette")
importFrom("stats", "na.omit", "setNames")
to your NAMESPACE file.
0 errors √ | 4 warnings x | 3 notes x
Error: R CMD check found WARNINGs```
RCMD check if throwing few warnigns thats failing the CI checks. @rahulchauhan049 @saxenism can you please take a look?
rcmdcheck::rcmdcheck(args = c("--no-manual"), error_on = "warning", check_dir = "check")