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Combining intracellular models with a single model #565

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Combining intracellular models with a single model

Combining intracellular models with a single model #565

Triggered via pull request August 21, 2026 16:09
@vincent-noelvincent-noel
synchronize #415
vincent-noel:feat/intracellulars
Status Failure
Total duration 2m 15s
Artifacts –

build_binaries.yml

on: pull_request
Matrix: macos_step0a
Matrix: macos_step0b
Matrix: ubuntu
Matrix: windows
Matrix: macos_step1
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54 errors and 28 warnings
ubuntu (rules, rules-sample, PhysiCell Rules, project)
Process completed with exit code 2.
ubuntu (interaction, interaction-sample, PhysiCell Interaction, interaction_demo)
Process completed with exit code 2.
ubuntu (template, template, PhysiCell Template, project)
The strategy configuration was canceled because "ubuntu.rules_rules-sample_PhysiC" failed
ubuntu (template, template, PhysiCell Template, project)
Process completed with exit code 2.
ubuntu (episode, episode-sample, PhysiCell Episode, project)
Process completed with exit code 2.
ubuntu (physimess, physimess-sample, PhysiMeSS, project)
The strategy configuration was canceled because "ubuntu.rules_rules-sample_PhysiC" failed
ubuntu (physimess, physimess-sample, PhysiMeSS, project)
Process completed with exit code 2.
ubuntu (physiboss-cell-lines, physiboss-cell-lines-sample, PhysiBoSS Cell Lines, PhysiBoSS_Cell_L...
The strategy configuration was canceled because "ubuntu.rules_rules-sample_PhysiC" failed
ubuntu (physiboss-cell-lines, physiboss-cell-lines-sample, PhysiBoSS Cell Lines, PhysiBoSS_Cell_L...
The operation was canceled.
ubuntu (template_BM, template_BM, PhysiBoSS Template, project, make Compile_MaBoSS PHYSICELL_CPP=...
The strategy configuration was canceled because "ubuntu.rules_rules-sample_PhysiC" failed
ubuntu (template_BM, template_BM, PhysiBoSS Template, project, make Compile_MaBoSS PHYSICELL_CPP=...
The operation was canceled.
ubuntu (physiboss-tutorial-invasion, physiboss-tutorial-invasion, PhysiBoSS Cancer Invasion, inva...
The strategy configuration was canceled because "ubuntu.rules_rules-sample_PhysiC" failed
ubuntu (physiboss-tutorial-invasion, physiboss-tutorial-invasion, PhysiBoSS Cancer Invasion, inva...
The operation was canceled.
ubuntu (physiboss-tutorial, physiboss-tutorial, PhysiBoSS tutorial, project, make Compile_MaBoSS ...
The strategy configuration was canceled because "ubuntu.rules_rules-sample_PhysiC" failed
ubuntu (physiboss-tutorial, physiboss-tutorial, PhysiBoSS tutorial, project, make Compile_MaBoSS ...
The operation was canceled.
macos_step0a (physiboss-tutorial, physiboss-tutorial, PhysiBoSS tutorial, project, make Compile_M...
Process completed with exit code 2.
macos_step0a (template_BM, template_BM, PhysiBoSS Template, project, make Compile_MaBoSS PHYSICEL...
The strategy configuration was canceled because "macos_step0a.physiboss-tutorial_physib" failed
macos_step0a (physiboss-cell-lines, physiboss-cell-lines-sample, PhysiBoSS Cell Lines, PhysiBoSS_...
The strategy configuration was canceled because "macos_step0a.physiboss-tutorial_physib" failed
macos_step0a (rules, rules-sample, PhysiCell Rules, project)
The strategy configuration was canceled because "macos_step0a.physiboss-tutorial_physib" failed
macos_step0a (interaction, interaction-sample, PhysiCell Interaction, interaction_demo)
The strategy configuration was canceled because "macos_step0a.physiboss-tutorial_physib" failed
macos_step0a (template, template, PhysiCell Template, project)
The strategy configuration was canceled because "macos_step0a.physiboss-tutorial_physib" failed
macos_step0a (template, template, PhysiCell Template, project)
Process completed with exit code 2.
macos_step0a (physiboss-tutorial-invasion, physiboss-tutorial-invasion, PhysiBoSS Cancer Invasion...
The strategy configuration was canceled because "macos_step0a.physiboss-tutorial_physib" failed
macos_step0a (physiboss-tutorial-invasion, physiboss-tutorial-invasion, PhysiBoSS Cancer Invasion...
The operation was canceled.
macos_step0a (physimess, physimess-sample, PhysiMeSS, project)
The strategy configuration was canceled because "macos_step0a.physiboss-tutorial_physib" failed
macos_step0a (physimess, physimess-sample, PhysiMeSS, project)
The operation was canceled.
macos_step0b (rules, rules-sample, PhysiCell Rules, project)
The strategy configuration was canceled because "macos_step0b.template_template_PhysiCe" failed
macos_step0b (template, template, PhysiCell Template, project)
Process completed with exit code 2.
macos_step0b (physiboss-tutorial-invasion, physiboss-tutorial-invasion, PhysiBoSS Cancer Invasion...
The strategy configuration was canceled because "macos_step0b.template_template_PhysiCe" failed
macos_step0b (physiboss-cell-lines, physiboss-cell-lines-sample, PhysiBoSS Cell Lines, PhysiBoSS_...
The strategy configuration was canceled because "macos_step0b.template_template_PhysiCe" failed
macos_step0b (physimess, physimess-sample, PhysiMeSS, project)
The strategy configuration was canceled because "macos_step0b.template_template_PhysiCe" failed
macos_step0b (template_BM, template_BM, PhysiBoSS Template, project, make Compile_MaBoSS PHYSICEL...
The strategy configuration was canceled because "macos_step0b.template_template_PhysiCe" failed
macos_step0b (interaction, interaction-sample, PhysiCell Interaction, interaction_demo)
The strategy configuration was canceled because "macos_step0b.template_template_PhysiCe" failed
macos_step0b (physiboss-tutorial, physiboss-tutorial, PhysiBoSS tutorial, project, make Compile_M...
The strategy configuration was canceled because "macos_step0b.template_template_PhysiCe" failed
macos_step0b (episode, episode-sample, PhysiCell Episode, project)
The strategy configuration was canceled because "macos_step0b.template_template_PhysiCe" failed
macos_step0a (episode, episode-sample, PhysiCell Episode, project)
The strategy configuration was canceled because "macos_step0a.physiboss-tutorial_physib" failed
macos_step0a (episode, episode-sample, PhysiCell Episode, project)
The operation was canceled.
windows (template_BM, template_BM, PhysiBoSS Template, project, make Compile_MaBoSS PHYSICELL_CPP...
Process completed with exit code 2.
windows (interaction, interaction-sample, PhysiCell Interaction, interaction_demo)
The strategy configuration was canceled because "windows.template_BM_template_BM_P" failed
windows (interaction, interaction-sample, PhysiCell Interaction, interaction_demo)
Process completed with exit code 2.
windows (physiboss-tutorial-invasion, physiboss-tutorial-invasion, PhysiBoSS Cancer Invasion, inv...
The strategy configuration was canceled because "windows.template_BM_template_BM_P" failed
windows (physiboss-tutorial-invasion, physiboss-tutorial-invasion, PhysiBoSS Cancer Invasion, inv...
The operation was canceled.
windows (physimess, physimess-sample, PhysiMeSS, project)
The strategy configuration was canceled because "windows.template_BM_template_BM_P" failed
windows (physimess, physimess-sample, PhysiMeSS, project)
The operation was canceled.
windows (physiboss-tutorial, physiboss-tutorial, PhysiBoSS tutorial, project, make Compile_MaBoSS...
The strategy configuration was canceled because "windows.template_BM_template_BM_P" failed
windows (physiboss-tutorial, physiboss-tutorial, PhysiBoSS tutorial, project, make Compile_MaBoSS...
The operation was canceled.
windows (template, template, PhysiCell Template, project)
The strategy configuration was canceled because "windows.template_BM_template_BM_P" failed
windows (template, template, PhysiCell Template, project)
The operation was canceled.
windows (physiboss-cell-lines, physiboss-cell-lines-sample, PhysiBoSS Cell Lines, PhysiBoSS_Cell_...
The strategy configuration was canceled because "windows.template_BM_template_BM_P" failed
windows (physiboss-cell-lines, physiboss-cell-lines-sample, PhysiBoSS Cell Lines, PhysiBoSS_Cell_...
The operation was canceled.
windows (rules, rules-sample, PhysiCell Rules, project)
The strategy configuration was canceled because "windows.template_BM_template_BM_P" failed
windows (rules, rules-sample, PhysiCell Rules, project)
The operation was canceled.
windows (episode, episode-sample, PhysiCell Episode, project)
The strategy configuration was canceled because "windows.template_BM_template_BM_P" failed
windows (episode, episode-sample, PhysiCell Episode, project)
The operation was canceled.
ubuntu (rules, rules-sample, PhysiCell Rules, project)
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
ubuntu (interaction, interaction-sample, PhysiCell Interaction, interaction_demo)
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
ubuntu (template, template, PhysiCell Template, project)
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
ubuntu (episode, episode-sample, PhysiCell Episode, project)
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
ubuntu (physimess, physimess-sample, PhysiMeSS, project)
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
ubuntu (physiboss-cell-lines, physiboss-cell-lines-sample, PhysiBoSS Cell Lines, PhysiBoSS_Cell_L...
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
ubuntu (template_BM, template_BM, PhysiBoSS Template, project, make Compile_MaBoSS PHYSICELL_CPP=...
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
ubuntu (physiboss-tutorial-invasion, physiboss-tutorial-invasion, PhysiBoSS Cancer Invasion, inva...
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
ubuntu (physiboss-tutorial, physiboss-tutorial, PhysiBoSS tutorial, project, make Compile_MaBoSS ...
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
macos_step0a (physiboss-tutorial, physiboss-tutorial, PhysiBoSS tutorial, project, make Compile_M...
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
macos_step0a (template, template, PhysiCell Template, project)
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
macos_step0a (physiboss-tutorial-invasion, physiboss-tutorial-invasion, PhysiBoSS Cancer Invasion...
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
macos_step0a (physimess, physimess-sample, PhysiMeSS, project)
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
macos_step0b (template, template, PhysiCell Template, project)
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
macos_step0a (episode, episode-sample, PhysiCell Episode, project)
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
windows (template_BM, template_BM, PhysiBoSS Template, project, make Compile_MaBoSS PHYSICELL_CPP...
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
windows (interaction, interaction-sample, PhysiCell Interaction, interaction_demo)
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
windows (interaction, interaction-sample, PhysiCell Interaction, interaction_demo)
Failed to save: Unable to reserve cache with key msys2-pkgs-upd:true-conf:993977e7-files:af87ec42a8bbc8caeba0dd4385d1098754edbd09eae9474f679ae61ae18bbf14, another job may be creating this cache.
windows (physiboss-tutorial-invasion, physiboss-tutorial-invasion, PhysiBoSS Cancer Invasion, inv...
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
windows (physimess, physimess-sample, PhysiMeSS, project)
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
windows (physiboss-tutorial, physiboss-tutorial, PhysiBoSS tutorial, project, make Compile_MaBoSS...
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
windows (template, template, PhysiCell Template, project)
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
windows (physiboss-cell-lines, physiboss-cell-lines-sample, PhysiBoSS Cell Lines, PhysiBoSS_Cell_...
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
windows (physiboss-cell-lines, physiboss-cell-lines-sample, PhysiBoSS Cell Lines, PhysiBoSS_Cell_...
Failed to save: Unable to reserve cache with key msys2-pkgs-upd:true-conf:993977e7-files:af87ec42a8bbc8caeba0dd4385d1098754edbd09eae9474f679ae61ae18bbf14, another job may be creating this cache.
windows (rules, rules-sample, PhysiCell Rules, project)
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
windows (rules, rules-sample, PhysiCell Rules, project)
Failed to save: Unable to reserve cache with key msys2-pkgs-upd:true-conf:993977e7-files:af87ec42a8bbc8caeba0dd4385d1098754edbd09eae9474f679ae61ae18bbf14, another job may be creating this cache.
windows (episode, episode-sample, PhysiCell Episode, project)
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/checkout@v4. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
windows (episode, episode-sample, PhysiCell Episode, project)
Failed to save: Unable to reserve cache with key msys2-pkgs-upd:true-conf:993977e7-files:af87ec42a8bbc8caeba0dd4385d1098754edbd09eae9474f679ae61ae18bbf14, another job may be creating this cache.