APPT/requirements.txt at main · Bindwell/APPT · GitHub

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aiohttp==3.9.5
aiosignal==1.3.1
ankh==1.10.0
asttokens==2.4.1
async-timeout==4.0.3
attrs==23.2.0
biopython==1.83
certifi==2024.6.2
charset-normalizer==3.3.2
comm==0.2.2
datasets==2.20.0
debugpy==1.8.1
decorator==5.1.1
dill==0.3.8
exceptiongroup==1.2.1
executing==2.0.1
filelock==3.15.3
frozenlist==1.4.1
fsspec==2024.5.0
huggingface-hub==0.23.4
idna==3.7
ipykernel==6.29.4
ipython==8.25.0
jedi==0.19.1
Jinja2==3.1.5
jupyter_client==8.6.2
jupyter_core==5.7.2
MarkupSafe==2.1.5
matplotlib-inline==0.1.7
mpmath==1.3.0
multidict==6.0.5
multiprocess==0.70.16
nest-asyncio==1.6.0
networkx==3.2.1
numpy==2.0.0
nvidia-cublas-cu12==12.1.3.1
nvidia-cuda-cupti-cu12==12.1.105
nvidia-cuda-nvrtc-cu12==12.1.105
nvidia-cuda-runtime-cu12==12.1.105
nvidia-cudnn-cu12==8.9.2.26
nvidia-cufft-cu12==11.0.2.54
nvidia-curand-cu12==10.3.2.106
nvidia-cusolver-cu12==11.4.5.107
nvidia-cusparse-cu12==12.1.0.106
nvidia-nccl-cu12==2.20.5
nvidia-nvjitlink-cu12==12.1.105
nvidia-nvtx-cu12==12.1.105
packaging==24.1
pandas==2.2.2
parso==0.8.4
pexpect==4.9.0
pillow==10.3.0
platformdirs==4.2.2
prompt_toolkit==3.0.47
psutil==6.0.0
ptyprocess==0.7.0
pure-eval==0.2.2
pyarrow==16.1.0
pyarrow-hotfix==0.6
Pygments==2.18.0
PyQt5==5.15.10
PyQt5-Qt5==5.15.2
PyQt5-sip==12.13.0
python-dateutil==2.9.0.post0
pytz==2024.1
PyYAML==6.0.1
pyzmq==26.0.3
regex==2024.5.15
requests==2.32.3
safetensors==0.4.3
sentencepiece==0.1.99
six==1.16.0
stack-data==0.6.3
sympy==1.12
tokenizers==0.19.1
torch==2.3.1
torchaudio==2.3.1
torchvision==0.18.1
tornado==6.4.2
tqdm==4.66.4
traitlets==5.14.3
transformers==4.41.2
triton==2.3.1
typing_extensions==4.12.2
tzdata==2024.1
urllib3==2.2.2
wcwidth==0.2.13
xxhash==3.4.1
yarl==1.9.4
ankh
optuna
esm
plotly
matplotlib
transformers
lifelines
scikit-learn
wandb